BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D03SP1|AL428890
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig685 1720 0.0
>3x_Contig685
Length = 2775
Score = 1720 bits (867), Expect = 0.0
Identities = 868/869 (99%)
Strand = Plus / Minus
Query: 1 ggtagttatctttcttatgtaggatcttttcaatcttaagtttcatatcatttgagtagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 ggtagttatctttcttatgtaggatcttttcaatcttaagtttcatatcatttgagtagt 1518
Query: 61 tcatatcttcatgcaattgttctgtccttacgctcacaatcgattcagttttcttgggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 tcatatcttcatgcaattgttctgtccttacgctcacaatcgattcagttttcttgggtc 1458
Query: 121 gtcctcgtttctttggctgaattggaattggaagaacattgtgagaatgcttagctctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 gtcctcgtttctttggctgaattggaattggaagaacattgtgagaatgcttagctctcg 1398
Query: 181 aagcttttggaatacctcctgatgtgtcctggatattgttattattatcagtggtagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 aagcttttggaatacctcctgatgtgtcctggatattgttattattatcagtggtagtat 1338
Query: 241 tcttcttagattctgaagtaaaagatatattagttggatcaattagagattttctaggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 tcttcttagattctgaagtaaaagatatattagttggatcaattagagattttctaggcc 1278
Query: 301 ttcctcgccgtttctttaccggaagaccattttcatccaatataggttcttttttggcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 ttcctcgccgtttctttaccggaagaccattttcatccaatataggttcttttttggcgc 1218
Query: 361 ttttacgagcttctgtggttgggttctttcgtggtcgtcctcgttgttttttgattggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 ttttacgagcttctgtggttgggttctttcgtggtcgtcctcgttgttttttgattggat 1158
Query: 421 ttccatttgcatctaattcaaccggtacaacaggtttagttctcggtctaccacgtttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 ttccatttgcatctaattcaaccggtacaacaggtttagttctcggtctaccacgtttac 1098
Query: 481 gcttttctgctttgggcaatttaggcgtgttcaaagagcctatttgctgcaaactcgatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 gcttttctgctttgggcaatttaggcgtgttcaaagagcctatttgctgcaaactcgatt 1038
Query: 541 cctctgacaggaatgaaagakccattgcagacgagaggttggaatcattcattgttacag 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 cctctgacaggaatgaaagatccattgcagacgagaggttggaatcattcattgttacag 978
Query: 601 tacgccatagaaatcaaacctacagatcattcatgtaatgaaaccgtctgatgaaagtgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 tacgccatagaaatcaaacctacagatcattcatgtaatgaaaccgtctgatgaaagtgt 918
Query: 661 atttttactcttcttccaacaagattcgcaccctattcttctcttttgacaggacctagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 atttttactcttcttccaacaagattcgcaccctattcttctcttttgacaggacctagt 858
Query: 721 attcttcttgtccattcaggatgtaaatatgatttgatctcaaattgtgtcttctttttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 attcttcttgtccattcaggatgtaaatatgatttgatctcaaattgtgtcttctttttc 798
Query: 781 cacgaaagtgtaaacaaaagagagaaaaggatcatcacagctgaatattgaaagacaata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 cacgaaagtgtaaacaaaagagagaaaaggatcatcacagctgaatattgaaagacaata 738
Query: 841 aataggttataagaagacaagggcaggtc 869
|||||||||||||||||||||||||||||
Sbjct: 737 aataggttataagaagacaagggcaggtc 709
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7641
Number of Sequences: 1807
Number of extensions: 7641
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)